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Reported by Evan Shaw. The problem is that $(git --exec-path) includes a 'git' binary which is incompatible with the one in /usr/bin; if you run it, it gives you an error about libiconv2.dll. You might think we could just add $(git --exec-path) at the *end* of PATH, but then if there are multiple versions of git installed, we could end up with the wrong one; earlier versions used to put git-sh-setup in /usr/bin, so we'd pick up that one before the new one. So now we just set PATH back to its original value right after running git-sh-setup, and we should be okay.
Please read git-subtree.txt for documentation. Please don't contact me using github mail; it's slow, ugly, and worst of all, redundant. Email me instead at apenwarr@gmail.com and I'll be happy to help. Avery